C. Dessimoz

Discipline

Histoire, Philosophie et Sociologie des sciences (4) Psychologie (1) Sciences de l'information et de la communication (1) Education (1) Archéologie et Préhistoire (1) Anthropologie biologique (1)

Type de document

Articles (40) Recensions (3)

Co-auteur

Date

Source

Mot-clé

gène (24) espèce (22) Species (22) Genes (20) Genomes (17) logiciel (13) spectacle (13) Software (13) Phylogeny (13) analyse (12) Databases (12) Databases (12) Databases (12) Animals (12) Analysis (12) Ontology (11) Families (11) Phylogeny (11) Methods (10) Methods (10) besoin (9) puits (8) ressources (8) méthode (8) abords (agglomération) (8) Implements (8) Tools (8) Example (8) Algorithms (8) Number (8)

Documents écrit par C. Dessimoz (40) | parle de C. Dessimoz (0)

OMAMO: orthology-based alternative model organism selection.
A. Nicheperovich et al. (13 mai 2022)
Bio-SODA UX: enabling natural language question answering over knowledge graphs with user disambiguation.
A.C. Sima et al. (2022)
OMAmer: tree-driven and alignment-free protein assignment to subfamilies outperforms closest sequence approaches.
V. Rossier et al. (29 sept. 2021)
Gene Duplication and Gain in the Trematode Atriophallophorus winterbourni Contributes to Adaptation to Parasitism.
N. Zajac et al. (1 mars 2021)
OMA orthology in 2021: website overhaul, conserved isoforms, ancestral gene order and more.
A.M. Altenhoff et al. (8 janv. 2021)
A putative origin of the insect chemosensory receptor superfamily in the last common eukaryotic ancestor
R. Benton et al. (4 déc. 2020)
A generalized Robinson-Foulds distance for labeled trees.
S. Briand et al. (18 nov. 2020)
Only a Single Taxonomically Restricted Gene Family in the Drosophila melanogaster Subgroup Can Be Identified with High Confidence.
K. Zile et al. (1 août 2020)
The Quest for Orthologs benchmark service and consensus calls in 2020.
A.M. Altenhoff et al. (2 juil. 2020)
Benchmarking gene ontology function predictions using negative annotations.
A. Warwick Vesztrocy et al. (1 juil. 2020)
Scalable phylogenetic profiling using MinHash uncovers likely eukaryotic sexual reproduction genes.
D. Moi et al.
New genome assembly of the barn owl (Tyto alba alba).
A.L. Ducrest et al.
Identifying orthologs with OMA: A primer.
M. Zahn-Zabal et al. (2020)
iHam and pyHam: visualizing and processing hierarchical orthologous groups.
C.M. Train et al. (15 juil. 2019)
OMA standalone: orthology inference among public and custom genomes and transcriptomes.
A.M. Altenhoff et al.
Phylogenetic approaches to identifying fragments of the same gene, with application to the wheat genome.
I. Piližota et al. (1 avr. 2019)
Expanding the Orthologous Matrix (OMA) programmatic interfaces: REST API and the OmaDB packages for R and Python.
K. Kaleb et al. (2019)
Enabling semantic queries across federated bioinformatics databases.
A.C. Sima et al. (1 janv. 2019)
Assigning confidence scores to homoeologs using fuzzy logic.
N.M. Glover et al. (2019)
RecPhyloXML: a format for reconciled gene trees.
W. Duchemin et al. (1 nov. 2018)
The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces.
A.M. Altenhoff et al. (4 janv. 2018)
GOATOOLS: A Python library for Gene Ontology analyses.
D.V. Klopfenstein et al. (2018)
Submit a Topic Page to PLOS Computational Biology and Wikipedia.
D. Mietchen et al. (2018)
Gene Ontology: Pitfalls, Biases, and Remedies.
P. Gaudet et al. (2017)
Orthologous Matrix (OMA) algorithm 2.0: more robust to asymmetric evolutionary rates and more scalable hierarchical orthologous group inference
C.-M. Train et al. (2017)

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