Metagenomic analysis of virome cross-talk between cultivated Solanum lycopersicum and wild Solanum nigrum
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Date
25 juillet 2019
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- doi: 10.15454/S486RR
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Medicine, Health and Life SciencesSujets proches
Nightshade, Common Black nightshade Poisonberry Nightshade, Black Common nightshade Solanum rubrum Blackberry nightshade Nightshade, BlackberryCiter ce document
Yuxin Ma et al., « Metagenomic analysis of virome cross-talk between cultivated Solanum lycopersicum and wild Solanum nigrum », Recherche Data Gouv, ID : 10.15454/S486RR
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We selected tomato (Solanum lycopersicum) and european black nightshade (Solanum nigrum) as a pair of related crop-weed species to study the diversity and potential flow of viral populations using high throughput sequencing (HTS) based metagenomics. A total of 20 libraries were prepared and sequenced on an Illumina HiSeq 3000 system at the GenoToul platform (INRA Toulouse, France).