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Date
19 juin 2023
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- doi: 10.57745/3W8CCV
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Computer and Information Science Medicine, Health and Life Sciences Protein Conformation Single-Stranded DNA Binding Proteins Benchmarking DNA, Single-StrandedSujets proches
Deoxyribonucleic acid TNA (Nucleic acid) Desoxyribonucleic acid Thymonucleic acid Structures Edifices HallsCiter ce document
Dominique MIAS-LUCQUIN et al., « Benchmark of proteins bound to single-stranded DNA », Recherche Data Gouv, ID : 10.57745/3W8CCV
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We explored the Protein Data Bank (PDB) to collect protein–ssDNA structures and create a multi‐conformational docking benchmark including both bound and unbound protein structures. Due to ssDNA high flexibility when not bound, no ssDNA unbound structure is included in the benchmark. This benchmark is, to our knowledge, the first one made to peruse available structures of ssDNA–protein interactions to such an extent, aiming to improve computational docking tools dedicated to this kind of molecular interactions.